Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Gm6365-201ENSMUST00000054711 744 ntBASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ddx47Q9CWX9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Gm10493-201ENSMUST00000097270 612 ntBASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ddx47Q9CWX9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Gm11927-201ENSMUST00000118472 759 ntBASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Gm10033-202ENSMUST00000211874 928 ntBASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ddx47Q9CWX9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Gm5874-201ENSMUST00000096101 508 ntBASIC17.27■□□□□ 0.36
Ddx47Q9CWX9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx47Q9CWX9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx47Q9CWX9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Ddx47Q9CWX9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms