Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Lsm7Q9CQQ8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lsm7Q9CQQ8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lsm7Q9CQQ8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lsm7Q9CQQ8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Gm45328-201ENSMUST00000210942 917 ntBASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Lsm7Q9CQQ8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Lsm7Q9CQQ8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm7Q9CQQ8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm7Q9CQQ8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Ank2-226ENSMUST00000189368 339 ntBASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms