Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim34aQ99PP6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim34aQ99PP6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim34aQ99PP6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Gm18733-201ENSMUST00000173950 856 ntBASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Gm44430-201ENSMUST00000203376 995 ntBASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34aQ99PP6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim34aQ99PP6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34aQ99PP6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.63■□□□□ 0.89
Trim34aQ99PP6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34aQ99PP6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34aQ99PP6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.63■□□□□ 0.89
Trim34aQ99PP6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34aQ99PP6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34aQ99PP6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim34aQ99PP6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34aQ99PP6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim34aQ99PP6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34aQ99PP6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Rps4l-201ENSMUST00000071745 943 ntBASIC20.61■□□□□ 0.89
Trim34aQ99PP6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34aQ99PP6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.6■□□□□ 0.89
Trim34aQ99PP6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.6■□□□□ 0.89
Trim34aQ99PP6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms