Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.69■□□□□ 0.74
Hdac9Q99N13 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hdac9Q99N13 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.68■□□□□ 0.74
Hdac9Q99N13 Gm7862-201ENSMUST00000121461 292 ntBASIC19.68■□□□□ 0.74
Hdac9Q99N13 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.68■□□□□ 0.74
Hdac9Q99N13 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Gm6296-201ENSMUST00000222599 943 ntBASIC19.68■□□□□ 0.74
Hdac9Q99N13 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.68■□□□□ 0.74
Hdac9Q99N13 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.68■□□□□ 0.74
Hdac9Q99N13 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hdac9Q99N13 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Hdac9Q99N13 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.66■□□□□ 0.74
Hdac9Q99N13 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.66■□□□□ 0.74
Hdac9Q99N13 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac9Q99N13 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hdac9Q99N13 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.65■□□□□ 0.74
Hdac9Q99N13 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Gm27525-201ENSMUST00000184465 107 ntBASIC19.65■□□□□ 0.74
Hdac9Q99N13 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.65■□□□□ 0.74
Hdac9Q99N13 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.65■□□□□ 0.74
Hdac9Q99N13 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac9Q99N13 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Hdac9Q99N13 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.64■□□□□ 0.74
Hdac9Q99N13 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Hdac9Q99N13 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Hdac9Q99N13 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms