Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smarcd2Q99JR8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smarcd2Q99JR8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Gm6376-201ENSMUST00000209407 580 ntBASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Gm5867-201ENSMUST00000063197 592 ntBASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smarcd2Q99JR8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcd2Q99JR8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcd2Q99JR8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smarcd2Q99JR8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Gm2651-201ENSMUST00000203560 838 ntBASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Gm6296-201ENSMUST00000222599 943 ntBASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.89■□□□□ 0.29
Smarcd2Q99JR8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Gm7862-201ENSMUST00000121461 292 ntBASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Gm18206-201ENSMUST00000207027 926 ntBASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smarcd2Q99JR8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd2Q99JR8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd2Q99JR8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd2Q99JR8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Smarcd2Q99JR8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd2Q99JR8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.87■□□□□ 0.29
Smarcd2Q99JR8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.87■□□□□ 0.29
Smarcd2Q99JR8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd2Q99JR8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.87■□□□□ 0.29
Smarcd2Q99JR8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd2Q99JR8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms