Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdha3Q91Y16 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha3Q91Y16 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha3Q91Y16 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha3Q91Y16 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.52■□□□□ 0.4
Pcdha3Q91Y16 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.52■□□□□ 0.4
Pcdha3Q91Y16 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha3Q91Y16 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pcdha3Q91Y16 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdha3Q91Y16 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha3Q91Y16 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdha3Q91Y16 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.52■□□□□ 0.4
Pcdha3Q91Y16 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
Pcdha3Q91Y16 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha3Q91Y16 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pcdha3Q91Y16 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha3Q91Y16 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha3Q91Y16 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pcdha3Q91Y16 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha3Q91Y16 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Pcdha3Q91Y16 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha3Q91Y16 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha3Q91Y16 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdha3Q91Y16 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdha3Q91Y16 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdha3Q91Y16 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Gm10013-201ENSMUST00000106074 672 ntBASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Gm18101-201ENSMUST00000215769 548 ntBASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdha3Q91Y16 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdha3Q91Y16 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms