Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb20Q91XZ9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Gm13333-201ENSMUST00000119424 781 ntBASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Gm9723-201ENSMUST00000192100 457 ntBASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Gm42651-201ENSMUST00000199851 1339 ntBASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb20Q91XZ9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Gm5587-201ENSMUST00000206270 674 ntBASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb20Q91XZ9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Gm38188-201ENSMUST00000192879 856 ntBASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Gm45657-201ENSMUST00000211318 1349 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms