Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Gm18958-201ENSMUST00000174258 762 ntBASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb8Q91XZ2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb8Q91XZ2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb8Q91XZ2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb8Q91XZ2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb8Q91XZ2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb8Q91XZ2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb8Q91XZ2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb8Q91XZ2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb8Q91XZ2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb8Q91XZ2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb8Q91XZ2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb8Q91XZ2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb8Q91XZ2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb8Q91XZ2 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb8Q91XZ2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms