Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb4Q91XX6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgb4Q91XX6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgb4Q91XX6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhgb4Q91XX6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms