Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim60Q8VI40 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.35■□□□□ 0.37
Trim60Q8VI40 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim60Q8VI40 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim60Q8VI40 Gm5643-201ENSMUST00000117081 966 ntBASIC17.34■□□□□ 0.37
Trim60Q8VI40 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim60Q8VI40 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim60Q8VI40 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim60Q8VI40 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim60Q8VI40 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim60Q8VI40 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim60Q8VI40 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim60Q8VI40 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim60Q8VI40 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim60Q8VI40 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim60Q8VI40 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim60Q8VI40 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trim60Q8VI40 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim60Q8VI40 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim60Q8VI40 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim60Q8VI40 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim60Q8VI40 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim60Q8VI40 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim60Q8VI40 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim60Q8VI40 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Trim60Q8VI40 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.32■□□□□ 0.36
Trim60Q8VI40 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim60Q8VI40 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim60Q8VI40 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim60Q8VI40 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim60Q8VI40 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim60Q8VI40 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim60Q8VI40 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim60Q8VI40 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim60Q8VI40 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim60Q8VI40 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim60Q8VI40 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim60Q8VI40 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim60Q8VI40 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms