Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 Gm11539-201ENSMUST00000119837 557 ntBASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 Gm13436-201ENSMUST00000120418 567 ntBASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4aQ8VEJ9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps4aQ8VEJ9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Vps4aQ8VEJ9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.27■□□□□ 0.19
Vps4aQ8VEJ9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Gm7889-201ENSMUST00000185591 958 ntBASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps4aQ8VEJ9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 Timm23-208ENSMUST00000226683 750 ntBASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 Odf3b-204ENSMUST00000227834 930 ntBASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps4aQ8VEJ9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps4aQ8VEJ9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms