Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nkd2Q8VE28 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nkd2Q8VE28 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nkd2Q8VE28 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Gm33142-201ENSMUST00000193913 867 ntBASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Gm4974-201ENSMUST00000209974 875 ntBASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkd2Q8VE28 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.28■□□□□ 0.04
Nkd2Q8VE28 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkd2Q8VE28 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Gm10418-201ENSMUST00000100943 576 ntBASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Gm6345-202ENSMUST00000180900 204 ntBASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Nkd2Q8VE28 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nkd2Q8VE28 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd2Q8VE28 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.27■□□□□ 0.03
Nkd2Q8VE28 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd2Q8VE28 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd2Q8VE28 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd2Q8VE28 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd2Q8VE28 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkd2Q8VE28 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd2Q8VE28 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd2Q8VE28 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Nkd2Q8VE28 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd2Q8VE28 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd2Q8VE28 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkd2Q8VE28 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms