Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Vps39Q8R5L3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Gm27000-201ENSMUST00000182943 842 ntBASIC16.77■□□□□ 0.28
Vps39Q8R5L3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Vps39Q8R5L3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps39Q8R5L3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps39Q8R5L3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps39Q8R5L3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.77■□□□□ 0.27
Vps39Q8R5L3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Vps39Q8R5L3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps39Q8R5L3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Vps39Q8R5L3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vps39Q8R5L3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Gm18958-201ENSMUST00000174258 762 ntBASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.76■□□□□ 0.27
Vps39Q8R5L3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps39Q8R5L3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms