Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chmp7Q8R1T1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chmp7Q8R1T1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Gm44430-201ENSMUST00000203376 995 ntBASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chmp7Q8R1T1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC21.39■■□□□ 1.02
Chmp7Q8R1T1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Chmp7Q8R1T1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
Chmp7Q8R1T1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Chmp7Q8R1T1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Chmp7Q8R1T1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Chmp7Q8R1T1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Chmp7Q8R1T1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Chmp7Q8R1T1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Gm18195-201ENSMUST00000207604 706 ntBASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Cmtm5-203ENSMUST00000227441 610 ntBASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chmp7Q8R1T1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chmp7Q8R1T1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms