Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Gm13418-201ENSMUST00000119097 944 ntBASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 Gm14140-201ENSMUST00000119999 995 ntBASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Zswim3Q8CFL8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Gm9727-201ENSMUST00000161387 555 ntBASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Gm4535-201ENSMUST00000182274 558 ntBASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Gm15590-201ENSMUST00000078419 552 ntBASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Gm10355-201ENSMUST00000097146 517 ntBASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Zswim3Q8CFL8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Zswim3Q8CFL8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Zswim3Q8CFL8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Zswim3Q8CFL8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
Zswim3Q8CFL8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Zswim3Q8CFL8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Gm15173-201ENSMUST00000122049 433 ntBASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zswim3Q8CFL8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Gm44430-201ENSMUST00000203376 995 ntBASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zswim3Q8CFL8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zswim3Q8CFL8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zswim3Q8CFL8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zswim3Q8CFL8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zswim3Q8CFL8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zswim3Q8CFL8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zswim3Q8CFL8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Zswim3Q8CFL8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms