Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Gm26524-201ENSMUST00000192339 390 ntBASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28bQ8CEG5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28bQ8CEG5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Gm6576-201ENSMUST00000169678 883 ntBASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc28bQ8CEG5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc28bQ8CEG5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc28bQ8CEG5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc28bQ8CEG5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.58■□□□□ 0.25
Ccdc28bQ8CEG5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc28bQ8CEG5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Gm10138-203ENSMUST00000206952 366 ntBASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Rab3c-203ENSMUST00000224180 967 ntBASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Gm5874-201ENSMUST00000096101 508 ntBASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc28bQ8CEG5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc28bQ8CEG5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc28bQ8CEG5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccdc28bQ8CEG5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ccdc28bQ8CEG5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms