Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf31Q8CCF0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Prpf31Q8CCF0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf31Q8CCF0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf31Q8CCF0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.34■□□□□ 0.53
Prpf31Q8CCF0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf31Q8CCF0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf31Q8CCF0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf31Q8CCF0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf31Q8CCF0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.34■□□□□ 0.53
Prpf31Q8CCF0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Prpf31Q8CCF0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf31Q8CCF0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf31Q8CCF0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf31Q8CCF0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf31Q8CCF0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Prpf31Q8CCF0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.33■□□□□ 0.53
Prpf31Q8CCF0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf31Q8CCF0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf31Q8CCF0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf31Q8CCF0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Prpf31Q8CCF0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.33■□□□□ 0.52
Prpf31Q8CCF0 Ank2-226ENSMUST00000189368 339 ntBASIC18.33■□□□□ 0.52
Prpf31Q8CCF0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.33■□□□□ 0.52
Prpf31Q8CCF0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf31Q8CCF0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf31Q8CCF0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf31Q8CCF0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf31Q8CCF0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf31Q8CCF0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Gm18115-201ENSMUST00000221209 621 ntBASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf31Q8CCF0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.31■□□□□ 0.52
Prpf31Q8CCF0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms