Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Gm10013-201ENSMUST00000106074 672 ntBASIC16.23■□□□□ 0.19
SynpoQ8CC35 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SynpoQ8CC35 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SynpoQ8CC35 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.22■□□□□ 0.19
SynpoQ8CC35 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SynpoQ8CC35 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.22■□□□□ 0.19
SynpoQ8CC35 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SynpoQ8CC35 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.21■□□□□ 0.19
SynpoQ8CC35 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
SynpoQ8CC35 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.21■□□□□ 0.19
SynpoQ8CC35 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SynpoQ8CC35 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SynpoQ8CC35 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SynpoQ8CC35 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SynpoQ8CC35 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Gm13401-201ENSMUST00000117074 291 ntBASIC16.2■□□□□ 0.18
SynpoQ8CC35 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SynpoQ8CC35 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms