Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Usp44Q8C2S0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp44Q8C2S0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp44Q8C2S0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Gm10013-201ENSMUST00000106074 672 ntBASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Gm37722-201ENSMUST00000193757 208 ntBASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Gm29707-201ENSMUST00000196325 491 ntBASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Usp44Q8C2S0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp44Q8C2S0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp44Q8C2S0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Usp44Q8C2S0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp44Q8C2S0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Usp44Q8C2S0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp44Q8C2S0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp44Q8C2S0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp44Q8C2S0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Usp44Q8C2S0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp44Q8C2S0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp44Q8C2S0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp44Q8C2S0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Usp44Q8C2S0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp44Q8C2S0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Usp44Q8C2S0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp44Q8C2S0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp44Q8C2S0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp44Q8C2S0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp44Q8C2S0 Gm11355-201ENSMUST00000121120 306 ntBASIC19.58■□□□□ 0.72
Usp44Q8C2S0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Usp44Q8C2S0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Usp44Q8C2S0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp44Q8C2S0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms