Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd1Q8C2E4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Gm11594-201ENSMUST00000122313 162 ntBASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd1Q8C2E4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Gm6376-201ENSMUST00000209407 580 ntBASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ptcd1Q8C2E4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ptcd1Q8C2E4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Ptcd1Q8C2E4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ptcd1Q8C2E4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ptcd1Q8C2E4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptcd1Q8C2E4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptcd1Q8C2E4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.57■□□□□ 0.88
Ptcd1Q8C2E4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ptcd1Q8C2E4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptcd1Q8C2E4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptcd1Q8C2E4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptcd1Q8C2E4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptcd1Q8C2E4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ptcd1Q8C2E4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.57■□□□□ 0.88
Ptcd1Q8C2E4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ptcd1Q8C2E4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ptcd1Q8C2E4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Gm8000-201ENSMUST00000188378 592 ntBASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ptcd1Q8C2E4 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Gm2213-201ENSMUST00000197485 688 ntBASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ptcd1Q8C2E4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Gm7862-201ENSMUST00000121461 292 ntBASIC20.54■□□□□ 0.88
Ptcd1Q8C2E4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms