Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp47Q8BY87 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Usp47Q8BY87 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp47Q8BY87 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Usp47Q8BY87 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Usp47Q8BY87 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Usp47Q8BY87 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Usp47Q8BY87 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Usp47Q8BY87 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Usp47Q8BY87 Gm36858-201ENSMUST00000194501 2391 ntBASIC23.63■■□□□ 1.37
Usp47Q8BY87 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Usp47Q8BY87 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Usp47Q8BY87 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Usp47Q8BY87 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Usp47Q8BY87 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Usp47Q8BY87 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC23.63■■□□□ 1.37
Usp47Q8BY87 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Usp47Q8BY87 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Usp47Q8BY87 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Usp47Q8BY87 AC121598.2-201ENSMUST00000228376 2325 ntBASIC23.63■■□□□ 1.37
Usp47Q8BY87 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Gm17971-201ENSMUST00000190239 806 ntBASIC23.62■■□□□ 1.37
Usp47Q8BY87 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp47Q8BY87 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Usp47Q8BY87 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC23.61■■□□□ 1.37
Usp47Q8BY87 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Usp47Q8BY87 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC23.61■■□□□ 1.37
Usp47Q8BY87 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC23.61■■□□□ 1.37
Usp47Q8BY87 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Usp47Q8BY87 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Usp47Q8BY87 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Usp47Q8BY87 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp47Q8BY87 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp47Q8BY87 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp47Q8BY87 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp47Q8BY87 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC23.6■■□□□ 1.37
Usp47Q8BY87 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp47Q8BY87 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp47Q8BY87 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp47Q8BY87 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp47Q8BY87 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Usp47Q8BY87 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Usp47Q8BY87 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Usp47Q8BY87 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Usp47Q8BY87 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC23.59■■□□□ 1.37
Usp47Q8BY87 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Usp47Q8BY87 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Usp47Q8BY87 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Usp47Q8BY87 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Usp47Q8BY87 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC23.59■■□□□ 1.37
Usp47Q8BY87 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC23.59■■□□□ 1.37
Usp47Q8BY87 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Usp47Q8BY87 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Usp47Q8BY87 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Usp47Q8BY87 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Usp47Q8BY87 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Usp47Q8BY87 Gm10052-201ENSMUST00000168019 960 ntBASIC23.58■■□□□ 1.37
Usp47Q8BY87 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC23.58■■□□□ 1.37
Usp47Q8BY87 Gm7729-201ENSMUST00000050143 801 ntBASIC23.58■■□□□ 1.37
Usp47Q8BY87 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Usp47Q8BY87 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Usp47Q8BY87 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp47Q8BY87 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp47Q8BY87 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp47Q8BY87 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
Usp47Q8BY87 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC23.57■■□□□ 1.36
Usp47Q8BY87 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC23.57■■□□□ 1.36
Usp47Q8BY87 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Usp47Q8BY87 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Usp47Q8BY87 AC159205.3-201ENSMUST00000224614 874 ntBASIC23.57■■□□□ 1.36
Usp47Q8BY87 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp47Q8BY87 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp47Q8BY87 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp47Q8BY87 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Usp47Q8BY87 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Usp47Q8BY87 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC23.57■■□□□ 1.36
Usp47Q8BY87 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Usp47Q8BY87 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Usp47Q8BY87 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Usp47Q8BY87 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Usp47Q8BY87 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms