Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cdk5rap1Q8BTW8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdk5rap1Q8BTW8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Cdk5rap1Q8BTW8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm17807-201ENSMUST00000186869 298 ntBASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdk5rap1Q8BTW8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm27742-201ENSMUST00000184667 60 ntBASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdk5rap1Q8BTW8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdk5rap1Q8BTW8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms