Protein–RNA interactions for Protein: Q8BKN5

Tubgcp5, Gamma-tubulin complex component 5, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp5Q8BKN5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tubgcp5Q8BKN5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tubgcp5Q8BKN5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tubgcp5Q8BKN5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tubgcp5Q8BKN5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tubgcp5Q8BKN5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tubgcp5Q8BKN5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Gm10653-202ENSMUST00000139570 835 ntBASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tubgcp5Q8BKN5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tubgcp5Q8BKN5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tubgcp5Q8BKN5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tubgcp5Q8BKN5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tubgcp5Q8BKN5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.7■□□□□ 0.26
Tubgcp5Q8BKN5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms