Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Phf7-203ENSMUST00000226565 1971 ntBASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 AA414768-201ENSMUST00000121924 1257 ntBASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Gm25016-201ENSMUST00000158399 131 ntBASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim23Q8BGX0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Gm37722-201ENSMUST00000193757 208 ntBASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.18■□□□□ 0.18
Trim23Q8BGX0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim23Q8BGX0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim23Q8BGX0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Gm6345-202ENSMUST00000180900 204 ntBASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Gm44450-201ENSMUST00000199528 114 ntBASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim23Q8BGX0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms