Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.67■□□□□ 0.74
Samm50Q8BGH2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Gm3375-201ENSMUST00000203929 796 ntBASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Samm50Q8BGH2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samm50Q8BGH2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Samm50Q8BGH2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.64■□□□□ 0.74
Samm50Q8BGH2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Samm50Q8BGH2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Samm50Q8BGH2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Samm50Q8BGH2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.64■□□□□ 0.73
Samm50Q8BGH2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.64■□□□□ 0.73
Samm50Q8BGH2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Samm50Q8BGH2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Samm50Q8BGH2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Samm50Q8BGH2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Samm50Q8BGH2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Samm50Q8BGH2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.64■□□□□ 0.73
Samm50Q8BGH2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Samm50Q8BGH2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samm50Q8BGH2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samm50Q8BGH2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms