Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.37■□□□□ 0.37
Trim62Q80V85 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Trim62Q80V85 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim62Q80V85 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.37■□□□□ 0.37
Trim62Q80V85 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim62Q80V85 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim62Q80V85 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim62Q80V85 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim62Q80V85 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim62Q80V85 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim62Q80V85 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.37■□□□□ 0.37
Trim62Q80V85 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.36■□□□□ 0.37
Trim62Q80V85 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim62Q80V85 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Trim62Q80V85 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.36■□□□□ 0.37
Trim62Q80V85 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim62Q80V85 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim62Q80V85 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trim62Q80V85 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim62Q80V85 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim62Q80V85 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim62Q80V85 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim62Q80V85 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim62Q80V85 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim62Q80V85 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim62Q80V85 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim62Q80V85 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trim62Q80V85 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim62Q80V85 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.35■□□□□ 0.37
Trim62Q80V85 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Gm11336-201ENSMUST00000118168 334 ntBASIC17.35■□□□□ 0.37
Trim62Q80V85 Gm23634-201ENSMUST00000175071 91 ntBASIC17.35■□□□□ 0.37
Trim62Q80V85 Gm7977-201ENSMUST00000193787 748 ntBASIC17.35■□□□□ 0.37
Trim62Q80V85 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.35■□□□□ 0.37
Trim62Q80V85 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim62Q80V85 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Phf7-203ENSMUST00000226565 1971 ntBASIC17.35■□□□□ 0.37
Trim62Q80V85 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim62Q80V85 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim62Q80V85 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim62Q80V85 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim62Q80V85 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim62Q80V85 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Trim62Q80V85 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim62Q80V85 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim62Q80V85 AA414768-201ENSMUST00000121924 1257 ntBASIC17.34■□□□□ 0.37
Trim62Q80V85 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim62Q80V85 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim62Q80V85 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim62Q80V85 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim62Q80V85 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim62Q80V85 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim62Q80V85 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim62Q80V85 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim62Q80V85 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim62Q80V85 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim62Q80V85 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim62Q80V85 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim62Q80V85 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim62Q80V85 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim62Q80V85 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim62Q80V85 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim62Q80V85 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim62Q80V85 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim62Q80V85 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim62Q80V85 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Trim62Q80V85 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim62Q80V85 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim62Q80V85 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim62Q80V85 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim62Q80V85 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim62Q80V85 Gm37722-201ENSMUST00000193757 208 ntBASIC17.33■□□□□ 0.36
Trim62Q80V85 Gm5587-201ENSMUST00000206270 674 ntBASIC17.33■□□□□ 0.36
Trim62Q80V85 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.33■□□□□ 0.36
Trim62Q80V85 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim62Q80V85 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim62Q80V85 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim62Q80V85 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim62Q80V85 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim62Q80V85 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim62Q80V85 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim62Q80V85 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim62Q80V85 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim62Q80V85 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim62Q80V85 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim62Q80V85 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Trim62Q80V85 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms