Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Gm11336-201ENSMUST00000118168 334 ntBASIC15.44■□□□□ 0.06
Pif1Q80SX8 Gm15794-201ENSMUST00000120182 631 ntBASIC15.44■□□□□ 0.06
Pif1Q80SX8 Gm34391-201ENSMUST00000203706 907 ntBASIC15.44■□□□□ 0.06
Pif1Q80SX8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.43■□□□□ 0.06
Pif1Q80SX8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pif1Q80SX8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Birc2-201ENSMUST00000054878 378 ntBASIC15.42■□□□□ 0.06
Pif1Q80SX8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.42■□□□□ 0.06
Pif1Q80SX8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pif1Q80SX8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pif1Q80SX8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Pif1Q80SX8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.41■□□□□ 0.06
Pif1Q80SX8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pif1Q80SX8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Gm27000-201ENSMUST00000182943 842 ntBASIC15.4■□□□□ 0.06
Pif1Q80SX8 Gm28659-201ENSMUST00000188013 759 ntBASIC15.4■□□□□ 0.06
Pif1Q80SX8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.4■□□□□ 0.06
Pif1Q80SX8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pif1Q80SX8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms