Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg5Q71M36 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.36■□□□□ 0.37
Cspg5Q71M36 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.36■□□□□ 0.37
Cspg5Q71M36 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cspg5Q71M36 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg5Q71M36 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg5Q71M36 Gm37025-201ENSMUST00000195159 829 ntBASIC17.35■□□□□ 0.37
Cspg5Q71M36 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.35■□□□□ 0.37
Cspg5Q71M36 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.35■□□□□ 0.37
Cspg5Q71M36 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cspg5Q71M36 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg5Q71M36 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg5Q71M36 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg5Q71M36 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg5Q71M36 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cspg5Q71M36 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cspg5Q71M36 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg5Q71M36 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg5Q71M36 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cspg5Q71M36 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg5Q71M36 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg5Q71M36 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg5Q71M36 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg5Q71M36 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg5Q71M36 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg5Q71M36 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg5Q71M36 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Cspg5Q71M36 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg5Q71M36 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cspg5Q71M36 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cspg5Q71M36 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
Cspg5Q71M36 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cspg5Q71M36 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Gm18958-201ENSMUST00000174258 762 ntBASIC17.33■□□□□ 0.36
Cspg5Q71M36 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.33■□□□□ 0.36
Cspg5Q71M36 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cspg5Q71M36 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Tgds-204ENSMUST00000228543 1594 ntBASIC17.32■□□□□ 0.36
Cspg5Q71M36 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cspg5Q71M36 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg5Q71M36 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg5Q71M36 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg5Q71M36 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cspg5Q71M36 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Cspg5Q71M36 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cspg5Q71M36 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cspg5Q71M36 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cspg5Q71M36 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms