Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.88■□□□□ 0.77
Nup188Q6ZQH8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nup188Q6ZQH8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup188Q6ZQH8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nup188Q6ZQH8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup188Q6ZQH8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup188Q6ZQH8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nup188Q6ZQH8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.88■□□□□ 0.77
Nup188Q6ZQH8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.88■□□□□ 0.77
Nup188Q6ZQH8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.88■□□□□ 0.77
Nup188Q6ZQH8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nup188Q6ZQH8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Gm25406-201ENSMUST00000157599 105 ntBASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Gm25911-201ENSMUST00000157621 56 ntBASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Nup188Q6ZQH8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Gm24513-201ENSMUST00000174964 138 ntBASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nup188Q6ZQH8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 AV026068-213ENSMUST00000223675 1171 ntBASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nup188Q6ZQH8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup188Q6ZQH8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup188Q6ZQH8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup188Q6ZQH8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nup188Q6ZQH8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup188Q6ZQH8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nup188Q6ZQH8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.83■□□□□ 0.77
Nup188Q6ZQH8 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.83■□□□□ 0.77
Nup188Q6ZQH8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nup188Q6ZQH8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup188Q6ZQH8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Nup188Q6ZQH8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nup188Q6ZQH8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.83■□□□□ 0.76
Nup188Q6ZQH8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Nup188Q6ZQH8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nup188Q6ZQH8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.83■□□□□ 0.76
Nup188Q6ZQH8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.83■□□□□ 0.76
Nup188Q6ZQH8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nup188Q6ZQH8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.83■□□□□ 0.76
Nup188Q6ZQH8 Gm10175-201ENSMUST00000086013 645 ntBASIC19.83■□□□□ 0.76
Nup188Q6ZQH8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nup188Q6ZQH8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms