Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Gm25990-201ENSMUST00000102440 86 ntBASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Gm5264-201ENSMUST00000190584 848 ntBASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ddx55Q6ZPL9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Gm13418-201ENSMUST00000119097 944 ntBASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Gm7230-201ENSMUST00000173026 815 ntBASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Gm2213-201ENSMUST00000197485 688 ntBASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Psmb5-202ENSMUST00000227257 622 ntBASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx55Q6ZPL9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Gm4535-201ENSMUST00000182274 558 ntBASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Gm10355-201ENSMUST00000097146 517 ntBASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Ddx55Q6ZPL9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx55Q6ZPL9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx55Q6ZPL9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx55Q6ZPL9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx55Q6ZPL9 Gm7506-201ENSMUST00000207758 815 ntBASIC19.03■□□□□ 0.64
Ddx55Q6ZPL9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx55Q6ZPL9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Ddx55Q6ZPL9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx55Q6ZPL9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx55Q6ZPL9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx55Q6ZPL9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ddx55Q6ZPL9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ddx55Q6ZPL9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ddx55Q6ZPL9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms