Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Gm13216-201ENSMUST00000117145 591 ntBASIC19.44■□□□□ 0.7
Slc44a1Q6X893 AA414768-201ENSMUST00000121924 1257 ntBASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc44a1Q6X893 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc44a1Q6X893 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Gm25016-201ENSMUST00000158399 131 ntBASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc44a1Q6X893 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Slc44a1Q6X893 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc44a1Q6X893 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slc44a1Q6X893 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a1Q6X893 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slc44a1Q6X893 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a1Q6X893 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Slc44a1Q6X893 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a1Q6X893 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.39■□□□□ 0.69
Slc44a1Q6X893 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Slc44a1Q6X893 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a1Q6X893 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a1Q6X893 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a1Q6X893 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc44a1Q6X893 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms