Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Npc1l1Q6T3U4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Npc1l1Q6T3U4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Npc1l1Q6T3U4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Npc1l1Q6T3U4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Npc1l1Q6T3U4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Npc1l1Q6T3U4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Npc1l1Q6T3U4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Npc1l1Q6T3U4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.07■□□□□ 0.8
Npc1l1Q6T3U4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Npc1l1Q6T3U4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Npc1l1Q6T3U4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Gm11336-201ENSMUST00000118168 334 ntBASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Npc1l1Q6T3U4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Gm34391-201ENSMUST00000203706 907 ntBASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Npc1l1Q6T3U4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npc1l1Q6T3U4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.04■□□□□ 0.8
Npc1l1Q6T3U4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Npc1l1Q6T3U4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npc1l1Q6T3U4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.04■□□□□ 0.8
Npc1l1Q6T3U4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Npc1l1Q6T3U4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npc1l1Q6T3U4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Npc1l1Q6T3U4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npc1l1Q6T3U4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Npc1l1Q6T3U4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Npc1l1Q6T3U4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.03■□□□□ 0.8
Npc1l1Q6T3U4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Npc1l1Q6T3U4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Npc1l1Q6T3U4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Npc1l1Q6T3U4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Npc1l1Q6T3U4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.02■□□□□ 0.79
Npc1l1Q6T3U4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Npc1l1Q6T3U4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Npc1l1Q6T3U4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.02■□□□□ 0.79
Npc1l1Q6T3U4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
Npc1l1Q6T3U4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.01■□□□□ 0.79
Npc1l1Q6T3U4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms