Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prrt3Q6PE13 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prrt3Q6PE13 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Prrt3Q6PE13 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prrt3Q6PE13 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Gm44044-201ENSMUST00000205178 1089 ntBASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.57■□□□□ 0.4
Prrt3Q6PE13 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Gm18515-201ENSMUST00000219755 797 ntBASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prrt3Q6PE13 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Gm12106-201ENSMUST00000116006 1200 ntBASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Gm37319-201ENSMUST00000193500 636 ntBASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prrt3Q6PE13 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Gm24589-201ENSMUST00000116692 94 ntBASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Gm18115-201ENSMUST00000221209 621 ntBASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.54■□□□□ 0.4
Prrt3Q6PE13 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.53■□□□□ 0.4
Prrt3Q6PE13 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Prrt3Q6PE13 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prrt3Q6PE13 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.53■□□□□ 0.4
Prrt3Q6PE13 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Prrt3Q6PE13 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Prrt3Q6PE13 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Prrt3Q6PE13 Gm34391-201ENSMUST00000203706 907 ntBASIC17.53■□□□□ 0.4
Prrt3Q6PE13 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.53■□□□□ 0.4
Prrt3Q6PE13 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prrt3Q6PE13 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prrt3Q6PE13 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prrt3Q6PE13 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms