Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Mir5130-201ENSMUST00000175160 84 ntBASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Gm45058-201ENSMUST00000205810 766 ntBASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smarcc2Q6PDG5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc2Q6PDG5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc2Q6PDG5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc2Q6PDG5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc2Q6PDG5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcc2Q6PDG5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Smarcc2Q6PDG5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Gm16061-201ENSMUST00000122167 857 ntBASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.51■□□□□ 0.71
Smarcc2Q6PDG5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms