Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd1Q61466 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd1Q61466 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Smarcd1Q61466 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd1Q61466 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd1Q61466 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd1Q61466 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.49■□□□□ 0.39
Smarcd1Q61466 Gm7367-201ENSMUST00000057611 492 ntBASIC17.49■□□□□ 0.39
Smarcd1Q61466 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarcd1Q61466 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd1Q61466 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smarcd1Q61466 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd1Q61466 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Smarcd1Q61466 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd1Q61466 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Smarcd1Q61466 Gm21362-201ENSMUST00000194272 928 ntBASIC17.48■□□□□ 0.39
Smarcd1Q61466 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd1Q61466 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd1Q61466 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd1Q61466 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarcd1Q61466 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smarcd1Q61466 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Gm14859-201ENSMUST00000117752 357 ntBASIC17.47■□□□□ 0.39
Smarcd1Q61466 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.47■□□□□ 0.39
Smarcd1Q61466 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Smarcd1Q61466 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarcd1Q61466 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Gm7284-201ENSMUST00000131667 944 ntBASIC17.46■□□□□ 0.39
Smarcd1Q61466 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Gm18421-201ENSMUST00000204122 625 ntBASIC17.46■□□□□ 0.39
Smarcd1Q61466 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.46■□□□□ 0.39
Smarcd1Q61466 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.46■□□□□ 0.39
Smarcd1Q61466 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarcd1Q61466 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Smarcd1Q61466 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Gm29707-201ENSMUST00000196325 491 ntBASIC17.45■□□□□ 0.38
Smarcd1Q61466 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.45■□□□□ 0.38
Smarcd1Q61466 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarcd1Q61466 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.44■□□□□ 0.38
Smarcd1Q61466 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd1Q61466 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd1Q61466 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smarcd1Q61466 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.44■□□□□ 0.38
Smarcd1Q61466 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms