Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Clns1aQ61189 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.39□□□□□ -0.11
Clns1aQ61189 Gm7514-201ENSMUST00000209475 934 ntBASIC14.39□□□□□ -0.11
Clns1aQ61189 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Clns1aQ61189 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.39□□□□□ -0.11
Clns1aQ61189 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clns1aQ61189 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.39□□□□□ -0.11
Clns1aQ61189 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clns1aQ61189 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Clns1aQ61189 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Clns1aQ61189 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Clns1aQ61189 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.38□□□□□ -0.11
Clns1aQ61189 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Clns1aQ61189 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Clns1aQ61189 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.38□□□□□ -0.11
Clns1aQ61189 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Clns1aQ61189 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Clns1aQ61189 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clns1aQ61189 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clns1aQ61189 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Clns1aQ61189 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Clns1aQ61189 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Clns1aQ61189 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Clns1aQ61189 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Clns1aQ61189 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clns1aQ61189 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clns1aQ61189 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.36□□□□□ -0.11
Clns1aQ61189 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Clns1aQ61189 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Clns1aQ61189 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clns1aQ61189 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clns1aQ61189 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.36□□□□□ -0.11
Clns1aQ61189 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clns1aQ61189 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms