Protein–RNA interactions for Protein: Q61136

Prpf4b, Serine/threonine-protein kinase PRP4 homolog, mousemouse

Known RBP Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4bQ61136 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf4bQ61136 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf4bQ61136 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Prpf4bQ61136 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf4bQ61136 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf4bQ61136 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf4bQ61136 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Prpf4bQ61136 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.19■□□□□ 0.66
Prpf4bQ61136 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4bQ61136 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Gm5417-201ENSMUST00000079706 384 ntBASIC19.18■□□□□ 0.66
Prpf4bQ61136 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Prpf4bQ61136 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Mir7071-201ENSMUST00000184847 69 ntBASIC19.17■□□□□ 0.66
Prpf4bQ61136 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.17■□□□□ 0.66
Prpf4bQ61136 Timm23-208ENSMUST00000226683 750 ntBASIC19.17■□□□□ 0.66
Prpf4bQ61136 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4bQ61136 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.16■□□□□ 0.66
Prpf4bQ61136 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.16■□□□□ 0.66
Prpf4bQ61136 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Prpf4bQ61136 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.16■□□□□ 0.66
Prpf4bQ61136 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4bQ61136 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4bQ61136 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Prpf4bQ61136 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4bQ61136 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4bQ61136 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4bQ61136 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4bQ61136 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4bQ61136 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4bQ61136 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4bQ61136 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4bQ61136 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4bQ61136 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.15■□□□□ 0.66
Prpf4bQ61136 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.15■□□□□ 0.66
Prpf4bQ61136 Gm21814-202ENSMUST00000203277 873 ntBASIC19.15■□□□□ 0.66
Prpf4bQ61136 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4bQ61136 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms