Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps13aQ5H8C4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Gm18421-201ENSMUST00000204122 625 ntBASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Gm7506-201ENSMUST00000207758 815 ntBASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps13aQ5H8C4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.59■□□□□ 0.25
Vps13aQ5H8C4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps13aQ5H8C4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps13aQ5H8C4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps13aQ5H8C4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Gm44872-201ENSMUST00000207864 420 ntBASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Mir8117-201ENSMUST00000184773 107 ntBASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.57■□□□□ 0.24
Vps13aQ5H8C4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps13aQ5H8C4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps13aQ5H8C4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms