Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scn2bQ56A07 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn2bQ56A07 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn2bQ56A07 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Dancr-204ENSMUST00000132389 2347 ntBASIC16.59■□□□□ 0.25
Scn2bQ56A07 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn2bQ56A07 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn2bQ56A07 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn2bQ56A07 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn2bQ56A07 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.58■□□□□ 0.24
Scn2bQ56A07 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.58■□□□□ 0.24
Scn2bQ56A07 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn2bQ56A07 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn2bQ56A07 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms