Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.9■□□□□ 0.94
Shank3Q4ACU6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shank3Q4ACU6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Gm24513-201ENSMUST00000174964 138 ntBASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shank3Q4ACU6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shank3Q4ACU6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shank3Q4ACU6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Shank3Q4ACU6 Gm2756-201ENSMUST00000195851 400 ntBASIC20.87■□□□□ 0.93
Shank3Q4ACU6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.87■□□□□ 0.93
Shank3Q4ACU6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.87■□□□□ 0.93
Shank3Q4ACU6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.87■□□□□ 0.93
Shank3Q4ACU6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shank3Q4ACU6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Shank3Q4ACU6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.87■□□□□ 0.93
Shank3Q4ACU6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.87■□□□□ 0.93
Shank3Q4ACU6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shank3Q4ACU6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shank3Q4ACU6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shank3Q4ACU6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shank3Q4ACU6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shank3Q4ACU6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.86■□□□□ 0.93
Shank3Q4ACU6 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.86■□□□□ 0.93
Shank3Q4ACU6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shank3Q4ACU6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shank3Q4ACU6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.86■□□□□ 0.93
Shank3Q4ACU6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shank3Q4ACU6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shank3Q4ACU6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shank3Q4ACU6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.85■□□□□ 0.93
Shank3Q4ACU6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shank3Q4ACU6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shank3Q4ACU6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Shank3Q4ACU6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shank3Q4ACU6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.85■□□□□ 0.93
Shank3Q4ACU6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.85■□□□□ 0.93
Shank3Q4ACU6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shank3Q4ACU6 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.85■□□□□ 0.93
Shank3Q4ACU6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Gm27397-201ENSMUST00000184997 107 ntBASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shank3Q4ACU6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shank3Q4ACU6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shank3Q4ACU6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shank3Q4ACU6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shank3Q4ACU6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.83■□□□□ 0.93
Shank3Q4ACU6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Shank3Q4ACU6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shank3Q4ACU6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shank3Q4ACU6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shank3Q4ACU6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.83■□□□□ 0.92
Shank3Q4ACU6 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.83■□□□□ 0.92
Shank3Q4ACU6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Shank3Q4ACU6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shank3Q4ACU6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms