Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkl5Q3UTQ8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkl5Q3UTQ8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cdkl5Q3UTQ8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cdkl5Q3UTQ8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkl5Q3UTQ8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkl5Q3UTQ8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Gm13559-201ENSMUST00000120476 863 ntBASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Gm7370-201ENSMUST00000219471 767 ntBASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl5Q3UTQ8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl5Q3UTQ8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl5Q3UTQ8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.39■□□□□ 0.7
Cdkl5Q3UTQ8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Gm10252-201ENSMUST00000209541 832 ntBASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl5Q3UTQ8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl5Q3UTQ8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl5Q3UTQ8 Haglr-201ENSMUST00000100000 2085 ntBASIC19.37■□□□□ 0.69
Cdkl5Q3UTQ8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.37■□□□□ 0.69
Cdkl5Q3UTQ8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cdkl5Q3UTQ8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl5Q3UTQ8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms