Protein–RNA interactions for Protein: Q3UR70

Tgfbrap1, Transforming growth factor-beta receptor-associated protein 1, mousemouse

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbrap1Q3UR70 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 Gm18115-201ENSMUST00000221209 621 ntBASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.19■□□□□ 0.5
Tgfbrap1Q3UR70 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbrap1Q3UR70 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.17■□□□□ 0.5
Tgfbrap1Q3UR70 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Gm18421-201ENSMUST00000204122 625 ntBASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbrap1Q3UR70 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbrap1Q3UR70 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Tgfbrap1Q3UR70 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tgfbrap1Q3UR70 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbrap1Q3UR70 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbrap1Q3UR70 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.14■□□□□ 0.49
Tgfbrap1Q3UR70 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbrap1Q3UR70 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbrap1Q3UR70 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbrap1Q3UR70 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.14■□□□□ 0.49
Tgfbrap1Q3UR70 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.14■□□□□ 0.49
Tgfbrap1Q3UR70 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbrap1Q3UR70 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbrap1Q3UR70 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbrap1Q3UR70 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfbrap1Q3UR70 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfbrap1Q3UR70 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tgfbrap1Q3UR70 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfbrap1Q3UR70 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms