Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm15565-201ENSMUST00000118890 427 ntBASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Gm43799-201ENSMUST00000201845 579 ntBASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Actl10-202ENSMUST00000226583 1501 ntBASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdnep1Q3TP92 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdnep1Q3TP92 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdnep1Q3TP92 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdnep1Q3TP92 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdnep1Q3TP92 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdnep1Q3TP92 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdnep1Q3TP92 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.37■□□□□ 0.69
Ctdnep1Q3TP92 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.37■□□□□ 0.69
Ctdnep1Q3TP92 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdnep1Q3TP92 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdnep1Q3TP92 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ctdnep1Q3TP92 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ctdnep1Q3TP92 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Gm2274-201ENSMUST00000184539 609 ntBASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Gm7889-201ENSMUST00000185591 958 ntBASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ctdnep1Q3TP92 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.34■□□□□ 0.69
Ctdnep1Q3TP92 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Ctdnep1Q3TP92 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctdnep1Q3TP92 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.33■□□□□ 0.69
Ctdnep1Q3TP92 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctdnep1Q3TP92 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctdnep1Q3TP92 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ctdnep1Q3TP92 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctdnep1Q3TP92 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms