Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim7Q3TJD7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Psmb5-202ENSMUST00000227257 622 ntBASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim7Q3TJD7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim7Q3TJD7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim7Q3TJD7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 Gm23935-201ENSMUST00000102303 57 ntBASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 Gm24270-201ENSMUST00000102326 57 ntBASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 Gm24245-201ENSMUST00000157318 57 ntBASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Pdlim7Q3TJD7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim7Q3TJD7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pdlim7Q3TJD7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.77■□□□□ 0.59
Pdlim7Q3TJD7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdlim7Q3TJD7 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.76■□□□□ 0.59
Pdlim7Q3TJD7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim7Q3TJD7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms