Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Nhej1Q3KNJ2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Nhej1Q3KNJ2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nhej1Q3KNJ2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nhej1Q3KNJ2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nhej1Q3KNJ2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nhej1Q3KNJ2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nhej1Q3KNJ2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nhej1Q3KNJ2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Gm37856-201ENSMUST00000191634 999 ntBASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Trmt13-210ENSMUST00000198454 880 ntBASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nhej1Q3KNJ2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Dancr-204ENSMUST00000132389 2347 ntBASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Gm27000-201ENSMUST00000182943 842 ntBASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nhej1Q3KNJ2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms