Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ptchd3Q0EEE2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Mir2861-201ENSMUST00000175539 82 ntBASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Trmt13-210ENSMUST00000198454 880 ntBASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Gm10138-203ENSMUST00000206952 366 ntBASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ptchd3Q0EEE2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Gm13158-201ENSMUST00000122007 736 ntBASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ptchd3Q0EEE2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ptchd3Q0EEE2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ptchd3Q0EEE2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ptchd3Q0EEE2 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.21■□□□□ 0.18
Ptchd3Q0EEE2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ptchd3Q0EEE2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Gm15375-201ENSMUST00000119510 849 ntBASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ptchd3Q0EEE2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms