Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Hspg2Q05793 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.35□□□□□ -0.43
Hspg2Q05793 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Hspg2Q05793 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Mir8112-201ENSMUST00000184382 131 ntBASIC12.35□□□□□ -0.43
Hspg2Q05793 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.35□□□□□ -0.43
Hspg2Q05793 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.35□□□□□ -0.43
Hspg2Q05793 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Gm6550-201ENSMUST00000187574 993 ntBASIC12.35□□□□□ -0.43
Hspg2Q05793 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hspg2Q05793 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hspg2Q05793 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hspg2Q05793 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hspg2Q05793 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hspg2Q05793 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Hspg2Q05793 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.34□□□□□ -0.43
Hspg2Q05793 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
Hspg2Q05793 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.34□□□□□ -0.43
Hspg2Q05793 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Hspg2Q05793 Gm27397-201ENSMUST00000184997 107 ntBASIC12.34□□□□□ -0.43
Hspg2Q05793 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hspg2Q05793 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hspg2Q05793 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Hspg2Q05793 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hspg2Q05793 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.33□□□□□ -0.44
Hspg2Q05793 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hspg2Q05793 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hspg2Q05793 Gm15920-201ENSMUST00000118998 402 ntBASIC12.33□□□□□ -0.44
Hspg2Q05793 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.33□□□□□ -0.44
Hspg2Q05793 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hspg2Q05793 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hspg2Q05793 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hspg2Q05793 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hspg2Q05793 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hspg2Q05793 Gm14140-201ENSMUST00000119999 995 ntBASIC12.33□□□□□ -0.44
Hspg2Q05793 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hspg2Q05793 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.33□□□□□ -0.44
Hspg2Q05793 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hspg2Q05793 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hspg2Q05793 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hspg2Q05793 Rarb-207ENSMUST00000225921 2756 ntBASIC12.32□□□□□ -0.44
Hspg2Q05793 Gm25990-201ENSMUST00000102440 86 ntBASIC12.32□□□□□ -0.44
Hspg2Q05793 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.32□□□□□ -0.44
Hspg2Q05793 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hspg2Q05793 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hspg2Q05793 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.32□□□□□ -0.44
Hspg2Q05793 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.32□□□□□ -0.44
Hspg2Q05793 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.32□□□□□ -0.44
Hspg2Q05793 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.32□□□□□ -0.44
Hspg2Q05793 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hspg2Q05793 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hspg2Q05793 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.32□□□□□ -0.44
Hspg2Q05793 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hspg2Q05793 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Hspg2Q05793 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hspg2Q05793 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hspg2Q05793 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hspg2Q05793 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.31□□□□□ -0.44
Hspg2Q05793 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.31□□□□□ -0.44
Hspg2Q05793 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Gm15590-201ENSMUST00000078419 552 ntBASIC12.31□□□□□ -0.44
Hspg2Q05793 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.31□□□□□ -0.44
Hspg2Q05793 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hspg2Q05793 Gm27628-201ENSMUST00000184911 107 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms