Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Otx1P80205 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.41□□□□□ -0.1
Otx1P80205 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.41□□□□□ -0.1
Otx1P80205 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.41□□□□□ -0.1
Otx1P80205 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.41□□□□□ -0.1
Otx1P80205 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Otx1P80205 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Otx1P80205 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Otx1P80205 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Otx1P80205 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Otx1P80205 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Otx1P80205 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Otx1P80205 Haglr-201ENSMUST00000100000 2085 ntBASIC14.4□□□□□ -0.1
Otx1P80205 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Otx1P80205 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Gm13186-201ENSMUST00000118031 316 ntBASIC14.4□□□□□ -0.1
Otx1P80205 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Otx1P80205 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
Otx1P80205 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.4□□□□□ -0.1
Otx1P80205 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.4□□□□□ -0.1
Otx1P80205 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Otx1P80205 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.4□□□□□ -0.1
Otx1P80205 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Otx1P80205 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Otx1P80205 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Otx1P80205 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.39□□□□□ -0.11
Otx1P80205 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.39□□□□□ -0.11
Otx1P80205 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Otx1P80205 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Otx1P80205 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otx1P80205 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otx1P80205 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.38□□□□□ -0.11
Otx1P80205 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otx1P80205 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.38□□□□□ -0.11
Otx1P80205 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otx1P80205 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otx1P80205 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Otx1P80205 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Otx1P80205 Actl10-202ENSMUST00000226583 1501 ntBASIC14.38□□□□□ -0.11
Otx1P80205 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otx1P80205 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Otx1P80205 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.38□□□□□ -0.11
Otx1P80205 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Otx1P80205 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.38□□□□□ -0.11
Otx1P80205 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otx1P80205 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otx1P80205 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.38□□□□□ -0.11
Otx1P80205 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Otx1P80205 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.38□□□□□ -0.11
Otx1P80205 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.38□□□□□ -0.11
Otx1P80205 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Otx1P80205 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.38□□□□□ -0.11
Otx1P80205 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Otx1P80205 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Otx1P80205 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Otx1P80205 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms