Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim4P70271 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim4P70271 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim4P70271 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdlim4P70271 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Pdlim4P70271 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.95□□□□□ -0.18
Pdlim4P70271 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.95□□□□□ -0.18
Pdlim4P70271 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pdlim4P70271 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Pdlim4P70271 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Pdlim4P70271 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Pdlim4P70271 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.95□□□□□ -0.18
Pdlim4P70271 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pdlim4P70271 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.95□□□□□ -0.18
Pdlim4P70271 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim4P70271 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pdlim4P70271 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pdlim4P70271 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pdlim4P70271 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.94□□□□□ -0.18
Pdlim4P70271 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Gm18958-201ENSMUST00000174258 762 ntBASIC13.94□□□□□ -0.18
Pdlim4P70271 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pdlim4P70271 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.94□□□□□ -0.18
Pdlim4P70271 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim4P70271 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pdlim4P70271 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.93□□□□□ -0.18
Pdlim4P70271 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pdlim4P70271 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pdlim4P70271 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim4P70271 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pdlim4P70271 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Pdlim4P70271 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Pdlim4P70271 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Gm6433-201ENSMUST00000118634 875 ntBASIC13.92□□□□□ -0.18
Pdlim4P70271 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.92□□□□□ -0.18
Pdlim4P70271 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Gm7889-201ENSMUST00000185591 958 ntBASIC13.92□□□□□ -0.18
Pdlim4P70271 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pdlim4P70271 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim4P70271 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms