Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ybx1P62960 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ybx1P62960 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.15■□□□□ 0.34
Ybx1P62960 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ybx1P62960 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ybx1P62960 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ybx1P62960 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ybx1P62960 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ybx1P62960 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ybx1P62960 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Ybx1P62960 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ybx1P62960 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ybx1P62960 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Ybx1P62960 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ybx1P62960 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ybx1P62960 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ybx1P62960 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ybx1P62960 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.14■□□□□ 0.33
Ybx1P62960 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ybx1P62960 Gm43514-201ENSMUST00000198852 424 ntBASIC17.14■□□□□ 0.33
Ybx1P62960 Gm6443-201ENSMUST00000203599 874 ntBASIC17.14■□□□□ 0.33
Ybx1P62960 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ybx1P62960 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.14■□□□□ 0.33
Ybx1P62960 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.14■□□□□ 0.33
Ybx1P62960 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ybx1P62960 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.14■□□□□ 0.33
Ybx1P62960 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ybx1P62960 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ybx1P62960 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ybx1P62960 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ybx1P62960 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Ybx1P62960 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.13■□□□□ 0.33
Ybx1P62960 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.13■□□□□ 0.33
Ybx1P62960 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.13■□□□□ 0.33
Ybx1P62960 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.13■□□□□ 0.33
Ybx1P62960 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.13■□□□□ 0.33
Ybx1P62960 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Gm18421-201ENSMUST00000204122 625 ntBASIC17.13■□□□□ 0.33
Ybx1P62960 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ybx1P62960 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ybx1P62960 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.12■□□□□ 0.33
Ybx1P62960 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ybx1P62960 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.12■□□□□ 0.33
Ybx1P62960 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.12■□□□□ 0.33
Ybx1P62960 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ybx1P62960 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.11■□□□□ 0.33
Ybx1P62960 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ybx1P62960 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ybx1P62960 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ybx1P62960 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ybx1P62960 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ybx1P62960 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ybx1P62960 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ybx1P62960 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.11■□□□□ 0.33
Ybx1P62960 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ybx1P62960 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ybx1P62960 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.11■□□□□ 0.33
Ybx1P62960 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ybx1P62960 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ybx1P62960 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Ybx1P62960 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Ybx1P62960 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.11■□□□□ 0.33
Ybx1P62960 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.11■□□□□ 0.33
Ybx1P62960 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ybx1P62960 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ybx1P62960 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ybx1P62960 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ybx1P62960 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.11■□□□□ 0.33
Ybx1P62960 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ybx1P62960 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ybx1P62960 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ybx1P62960 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ybx1P62960 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ybx1P62960 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.1■□□□□ 0.33
Ybx1P62960 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms